BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037D06LP1|AL430383
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1746 0.0
>3x_Contig1734
Length = 17938
Score = 1746 bits (881), Expect = 0.0
Identities = 894/897 (99%), Gaps = 1/897 (0%)
Strand = Plus / Minus
Query: 1 gatcttttatatatacgtgatttatttggcagatgcacctaaaatgaggaaaccctatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4529 gatcttttatatatacgtgatttatttggcagatgcacctaaaatgaggaaaccctatag 4470
Query: 61 cacgacggctgcaatgtggacgaatcccgtatcctaaactgggcttttagccattgataa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4469 cacgacggctgcaatgtggacgaatcccg-atcctaaactgggcttttagccattgataa 4411
Query: 121 ctactggatgcagccagtgagttactgcggacttacagacaagggtccactcttgccaat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4410 ctactggatgcagccagtgagtaactgcggacttacagacaagggtccactcttgccaat 4351
Query: 181 gctcctactaatggttctaatgggcatcaaagtcaaagccttgatcagttcatgttaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4350 gctcctactaatggttctaatgggcatcaaagtcaaagccttgatcagttcatgttaccc 4291
Query: 241 ggaccatatatacaaatatccgggtaacaaactcatatctctgctctggcgatctcatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4290 ggaccatatatacaaatatccgggtaacaaactcatatctctgctctggcgatctcatac 4231
Query: 301 tactgacaaaggaatctgtcatcaatcaacagacacctgagagagacaagcaacttcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4230 tactgacaaaggaatctgtcatcaatcaacagacacctgagagagacaagcaacttcata 4171
Query: 361 tggttaggagtatctgactatgggcgttgcaatgctaatataaattaaattatttacctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4170 tggttaggagtatctgactatgggcgttgcaatgctaatataaattaaattatttacctg 4111
Query: 421 ggtgtacatgttatgtagaatctcttcctaatccgttgcatgggcagcatggctggcatg 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4110 ggtgtacatgttatgtagaatctcttcctaatccgttgcatgggcggcatggctggcatg 4051
Query: 481 gctggcattgctgacatgtttacccaaatgctttactacagctacacctaagagcacaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4050 gctggcattgctgacatgtttacccaaatgctttactacagctacacctaagagcacaac 3991
Query: 541 tgtgagtataagaccacgtcttgctggaaactgccttctattgaatcttgaccaacatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3990 tgtgagtataagaccacgtcttgctggaaactgccttctattgaatcttgaccaacatgt 3931
Query: 601 tctacacctgcgttgcgtcctggtctctacaccggtgttcccgcaccttctacagtaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3930 tctacacctgcgttgcgtcctggtctctacaccggtgttcccgcaccttctacagtaata 3871
Query: 661 ccatggaggatacgtccagggaagctggtcgatatcagtaccggtattgcagctactggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3870 ccatggaggatacgtccagggaagctggtcgatatcagtaccggtattgcagctactggt 3811
Query: 721 agtggtggaattggtggcattatttggtatatcattggacgcatcatttgattcgtcatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3810 agtggtggaattggtggcattatttggtatatcattggacgcatcatttgattcgtcatt 3751
Query: 781 tggttcatcatttggttcatcatttgatgcctcttgatgccgagaagcaccggtagacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3750 tggttcatcatttggttcatcatttgatgcctcttgatgccgagaagcaccggtagacga 3691
Query: 841 accttgtccgactgcttcgtcatacgacggaagaatacctgattgtttaactgacgc 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3690 accttgtccgactgcttcgtcatacgacggaagaatacctgattgtttaactgacgc 3634
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5248
Number of Sequences: 1807
Number of extensions: 5248
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)